ITCR https://bmi.stonybrookmedicine.edu/index.php/ en 3DSlicer Pathology and FeatureScape for Linked Radiology/Pathology Image Analysis Competitions https://bmi.stonybrookmedicine.edu/index.php/presentations/itcr/2015/3DSlicer_Pathology_and_FeatureScapefor_Linked_Radiology/Pathology_Image_Analysis_Competitions <span>3DSlicer Pathology and FeatureScape for Linked Radiology/Pathology Image Analysis Competitions</span> <span><span lang="" about="/user/1" typeof="schema:Person" property="schema:name" datatype="">webadmin</span></span> <span>Mon, 10/31/2016 - 12:56</span> <div class="field field--name-body field--type-text-with-summary field--label-hidden field--item"><p>(<a href="https://bmi.stonybrookmedicine.edu/sites/default/files/u24-collaborative-projects-rev3.pdf#overlay-context=presentations/itcr/2015/3DSlicer_Pathology_and_FeatureScapefor_Linked_Radiology/Pathology_Image_Analysis_Competitions">PDF</a>)</p></div> <div class="field field--name-field-file-upload field--type-file field--label-hidden field--items"> <div class="field--item"><span class="file file--mime-application-pdf file--application-pdf icon-before"><span class="file-icon"><span class="icon glyphicon glyphicon-file text-primary" aria-hidden="true"></span></span><span class="file-link"><a href="https://bmi.stonybrookmedicine.edu/sites/default/files/u24-collaborative-projects-rev3.pdf" type="application/pdf; length=2934680" title="Open file in new window" target="_blank" data-toggle="tooltip" data-placement="bottom">u24-collaborative-projects-rev3.pdf</a></span><span class="file-size">2.8 MB</span></span></div> </div> <div class="field field--name-field-venue field--type-entity-reference field--label-inline"> <div class="field--label">Venue</div> <div class="field--item"><a href="/taxonomy/term/7" hreflang="en">ITCR</a></div> </div> Mon, 31 Oct 2016 16:56:44 +0000 webadmin 500 at https://bmi.stonybrookmedicine.edu Tools and Methods for Leveraging Digital Pathology in Integrative Cancer Research https://bmi.stonybrookmedicine.edu/index.php/presentations/itcr/2015/tools_and_methods_for_leveraging_digital_pathology_in_integrative_cancer_research <span>Tools and Methods for Leveraging Digital Pathology in Integrative Cancer Research</span> <span><span lang="" about="/user/1" typeof="schema:Person" property="schema:name" datatype="">webadmin</span></span> <span>Mon, 10/31/2016 - 12:40</span> <div class="field field--name-body field--type-text-with-summary field--label-hidden field--item"><p>This project Is developing a suite of open source tools and integrated informatics platform that will facilitate multi-scale, correlative analyses of high resolution whole slide tissue image data, spatially mapped genetics and molecular data for cancer research.These tools will allow quantitative analyses of the interplay between morphology and spatially mapped genetics and molecular data and will be used in studies that predict outcome and response to treatment, in radiogenomicand quantitative Radiology imaging studies and in studies to identify cancer targets.The software and methods will enable researchers to assemble and visualize detailed, multi-scale descriptions of tissue morphologic changes originating from a wide range of microscopy instruments and make it possible to efficiently manage, interrogate, and explore microscopy imaging data at multiple scales and to identify and analyze features across individuals and cohorts. - (<a href="https://bmi.stonybrookmedicine.edu/sites/default/files/u24-poster-rev5.pdf#overlay-context=presentations/amia/2016/scrum">PDF</a>)</p></div> <div class="field field--name-field-file-upload field--type-file field--label-hidden field--items"> <div class="field--item"><span class="file file--mime-application-pdf file--application-pdf icon-before"><span class="file-icon"><span class="icon glyphicon glyphicon-file text-primary" aria-hidden="true"></span></span><span class="file-link"><a href="https://bmi.stonybrookmedicine.edu/sites/default/files/u24-poster-rev5.pdf" type="application/pdf; length=2513605" title="Open file in new window" target="_blank" data-toggle="tooltip" data-placement="bottom">u24-poster-rev5.pdf</a></span><span class="file-size">2.4 MB</span></span></div> </div> <div class="field field--name-field-venue field--type-entity-reference field--label-inline"> <div class="field--label">Venue</div> <div class="field--item"><a href="/taxonomy/term/7" hreflang="en">ITCR</a></div> </div> Mon, 31 Oct 2016 16:40:39 +0000 webadmin 499 at https://bmi.stonybrookmedicine.edu ITCR - Tools to Analyze Morphology and Spatially Mapped Molecular Data https://bmi.stonybrookmedicine.edu/index.php/node/496 <span>ITCR - Tools to Analyze Morphology and Spatially Mapped Molecular Data</span> <span><span lang="" about="/user/266" typeof="schema:Person" property="schema:name" datatype="">ebremer</span></span> <span>Mon, 10/17/2016 - 12:16</span> <div class="field field--name-body field--type-text-with-summary field--label-hidden field--item"><p><span style="font-family: &quot;Courier New&quot;; font-size: 13.008px;">[video:https://www.youtube.com/watch?v=kShwIs0O5o4 width:1200 align:center autoplay:0]</span></p><p><strong>&nbsp;</strong><em>&nbsp;</em></p><p><span class="token punctuation"><span style="font-family: Courier New;"><br></span></span></p></div> <div class="field field--name-field-venue field--type-entity-reference field--label-inline"> <div class="field--label">Venue</div> <div class="field--item"><a href="/taxonomy/term/7" hreflang="en">ITCR</a></div> </div> Mon, 17 Oct 2016 16:16:11 +0000 ebremer 496 at https://bmi.stonybrookmedicine.edu