News and Events

Talks

1. BMI Grand Rounds: Enabling Biochemical "Big-Data" With Mass Spectrometry Metabolomics
   BMI Grand Rounds 4_18_2018 Adam Rosebrock.pdf164.21 KB
2. BMI Grand Rounds: Computational Challenges in Developing Reliable Systems for Next Generation Sequencing
   Chriaag Patel.pdf468.48 KB
3. Margaret Schedel: The Sounds of Science
   MargaretSchedel.pdf841.62 KB
4. Serverless OpenHealth at Data Commons Scale - Traversing the 20 Million Patient Records of New York's SPARCS dataset in real-time
   Jonas Almeida BMI Grand Rounds_announcement.pdf350.88 KB
5. Yanhui Liang Ph.D. dissertation defense: Integrative Image and Spatial Analytics for Three-Dimensional Digital Pathology
6. Information Technology Powering Cancer Research for Discover and Novel Hypothesis Generation -- Pathomics
   Summit 2017 panel saltz.pdf2.79 MB
7. Optimized color decomposition of localized whole slide images and convolutional neural network for intermediate prostate cancer classification
   Optimized Color Decomposition of Localized Whole.pdf4.32 MB
8. Using state-space models to infer the dynamics of gene expression driven by external and internal regulatory networks
9. Open Healthcare Data and Tools in Practice
   AHIMA Case examples of open data use.pdf7.24 MB
10. Dr. Almeida delivered the Keynote Address at Stanford's BCATS symposium
11. Using Cloud Platforms for Consumer-Driven Integration of Research and Operations

Talks

1. Aristeidis Sotiras: Advancing Big Neuroimaging Data Analysis for Precision Diagnostics
   SOTIRASAristeidisFlyer.pdf856.57 KB
2. Biomedical Informatics GRAND ROUNDS: Imaging Research Using PACS database: Examples using breast cancer, multiple sclerosis and TBI
   Tim Duong BMI Grand Rounds_announcement.pdf140.19 KB
3. Composite Likelihood Inference for Large-scale Healthcare Data by Jing Huang
4. Digital Minds author, Arlindo Oliveira, is talking at IACS Nov 15 !
5. 3DSlicer Pathology and FeatureScape for Linked Radiology/Pathology Image Analysis Competitions
   u24-collaborative-projects-rev3.pdf2.8 MB
6. ITCR - Tools to Analyze Morphology and Spatially Mapped Molecular Data
7. Analyzing Open Data in Healthcare Using Public APIs and Reproducible Workflows
8. Integrative Informatics and Predictive Modeling Support for Population Health
   AMIA-2015web.pdf1.64 MB
9. Talk: The Planet of the Apps: Web Computing for Scalable Research Informatics
   Almeida 2015_09_10.pdf395.69 KB
10. Tools and Methods for Leveraging Digital Pathology in Integrative Cancer Research
    u24-poster-rev5.pdf2.4 MB

Poster Presentation

1. A poster presentation on the internal and external gene expression dynamics to the Computational Aspects of Biological Information symposium
2. Scalable 3D Spatial Queries for Analytical Pathology Imaging with MapReduce
   3DSpatialCloudDB.pdf2.31 MB

Poster Presentation

1. S2CR3UM: A Solution to the In Silico Relevance, Reliability & Reproducibility Conundrum
   AMIA-SCRUM-2016-final7.pdf1.77 MB